This workshop, to be hosted in the afternoon of Bioinformatics Open Days 2020, is an introduction to differential gene expression analysis of medium-sized single-cell RNA-seq (scRNA-seq) obtained using the 10x Genomics Chromium System. Participants will learn about the basic concepts behind the technology, its applications and concepts, and go through a hands-on exercise where they will perform a re-analysis of a sample of ~3,000 cells from the Mouse Cell Atlas (MCA).
BioData.pt is the Portuguese distributed e-infrastructure for biological data and the Portuguese ELIXIR node.
BioData.pt supports the national scientific system through best practices in data management and state of the art data analysis.
It interfaces with both academia and industry, making research available for innovation, namely in sectors such as agro-food and forestry, sea, and health.
BioData.pt services include ELIXIR services such as our training programme and computing facilities, as well as consulting services in data analysis and management, and a number of community services.