Instituto Gulbenkian de Ciência

CPANG19 - Computational PANGenomics

Course description

Reference genomes have become central to bioinformatics approaches, and form the core of standard analyses using contemporary sequencing data. However, the use of linear reference genomes, which provide the sequence of one representative genome for a species, is increasingly becoming a limitation as the number of sequenced genomes grows. In particular, they tend to bias us away from the observation of variation in the genomes we study.

GOEnrichment

  • Posted on: 25 January 2019
  • By: Daniel Faria

GOEnrichment is a tool for performing GO enrichment analysis of gene sets, such as those obtained from RNA-seq or Microarray experiments, to help characterize them at the functional level. It is available both as stand-alone command line tool and in Galaxy Europe. A tutorial for the tool is also available at the Galaxy GitHub training website.

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