PseudoChecker consists in an integrated computational pipeline able to infer the coding status of a given eukaryotic nuclear protein-coding gene in single or multiple species of interest by taking advantage of existent genomic data.

Single-cell RNA-Seq analysis using a Seurat based graphical interface

This workshop, to be hosted in the afternoon of Bioinformatics Open Days 2020, is an introduction to differential gene expression analysis of medium-sized single-cell RNA-seq (scRNA-seq) obtained using the 10x Genomics Chromium System. Participants will learn about the basic concepts behind the technology, its applications and concepts, and go through a hands-on exercise where they will perform a re-analysis of a sample of ~3,000 cells from the Mouse Cell Atlas (MCA).