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BioData.pt is the Portuguese distributed infrastructure for biological data and the Portuguese ELIXIR node.
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Title
Responsible organization
EDAM Topic
4Pipe4
CoBiG²
,
cE3c
operation
ADOPS
IBMC - Instituto de Biologia Molecular e Celular
Sequence analysis
BECAS
Universidade de Aveiro
Data deposition, annotation and curation
,
Biomedical science
,
Literature and language
BLAST DataBase Manager
IBMC - Instituto de Biologia Molecular e Celular
Data management
Biome-Shiny
IGC - Instituto Gulbenkian de Ciência
Metagenomics
COEUS
Universidade de Aveiro
Ontology and terminology
,
Informatics
,
Data integration
,
Rare diseases
CoBAMP
Universidade do Minho
Systems biology
CoV2ID: Detection and Therapeutics Oligo Database for SARS-CoV-2
IDENTIFICA genetic testing
Viruses
Data Management Portal
BioData.pt
Data management
EAGLE
Universidade de Aveiro
Genomics
,
Sequencing
,
Viruses
EbolaID
CIIMAR - University of Porto
Probes and primers
GOEnrichment
IGC - Instituto Gulbenkian de Ciência
Gene-set enrichment analysis
GTO
Universidade de Aveiro
Proteomics
,
Workflows
,
Sequence analysis
,
Sequencing
GeCo3
Universidade de Aveiro
MENSAdb
CNC - Universidade de Coimbra
Membrane and lipoproteins
,
Small molecules
,
Lipids
,
Protein secondary structure
,
Imaging
MITOBREAK
CIIMAR - University of Porto
DNA mutation
NCBI Mass Downloader
CoBiG²
,
cE3c
Data retrieval
OR and DXR
CNC - Universidade de Coimbra
Protein structure analysis
,
Protein interactions
OptFlux
Universidade do Minho
Systems biology
PHENO
iBET - Instituto de Biologia Experimental e Tecnológica
Genotype and phenotype
PhagePromoter
Universidade do Minho
Computational biology
PseudoChecker
CIIMAR - University of Porto
Model organisms
,
Genetic variation
,
Gene transcript features
,
Gene expression
,
Sequence assembly
Python Video Annotator
Fundação Champalimaud
Data visualisation
SEDA
IBMC - Instituto de Biologia Molecular e Celular
Nucleic acid sequence analysis
Scaleus
Universidade de Aveiro
Biomedical science
,
Rare diseases
,
Data integration
,
Database management
SeaGrassTraitDB
CCMAR - Centro de Ciências do Mar
Biological databases
,
Biodiversity
Smash++
Universidade de Aveiro
DNA
,
Data visualisation
SpotONE
CNC - Universidade de Coimbra
Protein interactions
,
Small molecules
,
Machine learning
SpotOn
CNC - Universidade de Coimbra
Genes and proteins resources
,
Machine learning
,
Computational biology
Stem Cell Net
Systems Biology and Bioinformatics Laboratory
Systems biology
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